Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm8825-201ENSMUST00000182565 998 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm4518-201ENSMUST00000182638 718 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm9172-201ENSMUST00000212092 954 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.39□□□□□ -0.43
Slc6a1P31648 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Slc6a1P31648 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.38□□□□□ -0.43
Slc6a1P31648 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Slc6a1P31648 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.38□□□□□ -0.43
Slc6a1P31648 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Slc6a1P31648 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Gm12497-201ENSMUST00000138778 237 ntBASIC12.38□□□□□ -0.43
Slc6a1P31648 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.38□□□□□ -0.43
Slc6a1P31648 Gm43767-201ENSMUST00000198933 381 ntBASIC12.38□□□□□ -0.43
Slc6a1P31648 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.38□□□□□ -0.43
Slc6a1P31648 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.38□□□□□ -0.43
Slc6a1P31648 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.38□□□□□ -0.43
Slc6a1P31648 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.38□□□□□ -0.43
Slc6a1P31648 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Slc6a1P31648 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc6a1P31648 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.37□□□□□ -0.43
Slc6a1P31648 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Slc6a1P31648 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Slc6a1P31648 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms