Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.43□□□□□ -0.1
RxraP28700 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.43□□□□□ -0.1
RxraP28700 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
RxraP28700 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RxraP28700 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RxraP28700 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RxraP28700 Gm6973-201ENSMUST00000117080 721 ntBASIC14.42□□□□□ -0.1
RxraP28700 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.42□□□□□ -0.1
RxraP28700 Gm20553-201ENSMUST00000204205 844 ntBASIC14.42□□□□□ -0.1
RxraP28700 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.42□□□□□ -0.1
RxraP28700 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.42□□□□□ -0.1
RxraP28700 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.42□□□□□ -0.1
RxraP28700 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RxraP28700 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.42□□□□□ -0.1
RxraP28700 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxraP28700 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.41□□□□□ -0.1
RxraP28700 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.41□□□□□ -0.1
RxraP28700 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
RxraP28700 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.41□□□□□ -0.1
RxraP28700 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.41□□□□□ -0.1
RxraP28700 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.41□□□□□ -0.1
RxraP28700 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.41□□□□□ -0.1
RxraP28700 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.41□□□□□ -0.1
RxraP28700 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.41□□□□□ -0.1
RxraP28700 Gm45612-201ENSMUST00000211320 160 ntBASIC14.41□□□□□ -0.1
RxraP28700 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RxraP28700 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RxraP28700 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RxraP28700 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.41□□□□□ -0.1
RxraP28700 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.41□□□□□ -0.1
RxraP28700 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxraP28700 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RxraP28700 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.4□□□□□ -0.1
RxraP28700 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.4□□□□□ -0.1
RxraP28700 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.4□□□□□ -0.1
RxraP28700 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.4□□□□□ -0.1
RxraP28700 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RxraP28700 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RxraP28700 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RxraP28700 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms