Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nfkb1P25799 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.79□□□□□ -0.04
Nfkb1P25799 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nfkb1P25799 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.79□□□□□ -0.04
Nfkb1P25799 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nfkb1P25799 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.79□□□□□ -0.04
Nfkb1P25799 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nfkb1P25799 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Gm43703-201ENSMUST00000200523 763 ntBASIC14.79□□□□□ -0.04
Nfkb1P25799 Gm44855-201ENSMUST00000205725 362 ntBASIC14.79□□□□□ -0.04
Nfkb1P25799 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.79□□□□□ -0.04
Nfkb1P25799 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nfkb1P25799 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nfkb1P25799 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.78□□□□□ -0.04
Nfkb1P25799 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nfkb1P25799 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nfkb1P25799 Gm4875-201ENSMUST00000118257 786 ntBASIC14.78□□□□□ -0.04
Nfkb1P25799 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nfkb1P25799 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nfkb1P25799 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.78□□□□□ -0.04
Nfkb1P25799 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Nfkb1P25799 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nfkb1P25799 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Syt7-205ENSMUST00000224135 1557 ntBASIC14.77□□□□□ -0.04
Nfkb1P25799 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Nfkb1P25799 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.77□□□□□ -0.04
Nfkb1P25799 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Nfkb1P25799 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nfkb1P25799 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Nfkb1P25799 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.77□□□□□ -0.05
Nfkb1P25799 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.77□□□□□ -0.05
Nfkb1P25799 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.77□□□□□ -0.05
Nfkb1P25799 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Mir125a-201ENSMUST00000083545 68 ntBASIC14.77□□□□□ -0.05
Nfkb1P25799 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nfkb1P25799 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.77□□□□□ -0.05
Nfkb1P25799 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nfkb1P25799 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nfkb1P25799 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nfkb1P25799 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nfkb1P25799 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nfkb1P25799 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Nfkb1P25799 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms