Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.63□□□□□ -0.23
ApoeP08226 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.63□□□□□ -0.23
ApoeP08226 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
ApoeP08226 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.62□□□□□ -0.23
ApoeP08226 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.62□□□□□ -0.23
ApoeP08226 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ApoeP08226 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.62□□□□□ -0.23
ApoeP08226 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.62□□□□□ -0.23
ApoeP08226 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.62□□□□□ -0.23
ApoeP08226 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ApoeP08226 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ApoeP08226 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ApoeP08226 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.62□□□□□ -0.23
ApoeP08226 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
ApoeP08226 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.62□□□□□ -0.23
ApoeP08226 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ApoeP08226 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.62□□□□□ -0.23
ApoeP08226 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ApoeP08226 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.62□□□□□ -0.23
ApoeP08226 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ApoeP08226 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ApoeP08226 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ApoeP08226 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.61□□□□□ -0.23
ApoeP08226 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Gm7222-201ENSMUST00000117512 906 ntBASIC13.61□□□□□ -0.23
ApoeP08226 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.61□□□□□ -0.23
ApoeP08226 Gm8584-201ENSMUST00000171982 758 ntBASIC13.61□□□□□ -0.23
ApoeP08226 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.61□□□□□ -0.23
ApoeP08226 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ApoeP08226 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.61□□□□□ -0.23
ApoeP08226 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.61□□□□□ -0.23
ApoeP08226 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
ApoeP08226 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
ApoeP08226 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ApoeP08226 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ApoeP08226 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ApoeP08226 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.6□□□□□ -0.23
ApoeP08226 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ApoeP08226 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.6□□□□□ -0.23
ApoeP08226 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ApoeP08226 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ApoeP08226 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms