Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ClppO88696 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ClppO88696 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ClppO88696 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ClppO88696 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.09□□□□□ -0.15
ClppO88696 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.09□□□□□ -0.15
ClppO88696 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.09□□□□□ -0.15
ClppO88696 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ClppO88696 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.09□□□□□ -0.15
ClppO88696 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.09□□□□□ -0.15
ClppO88696 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.09□□□□□ -0.15
ClppO88696 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ClppO88696 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ClppO88696 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.09□□□□□ -0.15
ClppO88696 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ClppO88696 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClppO88696 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClppO88696 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ClppO88696 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClppO88696 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
ClppO88696 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ClppO88696 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Gm43767-201ENSMUST00000198933 381 ntBASIC14.08□□□□□ -0.16
ClppO88696 Gm20949-201ENSMUST00000206478 952 ntBASIC14.08□□□□□ -0.16
ClppO88696 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
ClppO88696 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.08□□□□□ -0.16
ClppO88696 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.08□□□□□ -0.16
ClppO88696 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.08□□□□□ -0.16
ClppO88696 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClppO88696 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ClppO88696 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ClppO88696 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.07□□□□□ -0.16
ClppO88696 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ClppO88696 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ClppO88696 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ClppO88696 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ClppO88696 Gm18049-201ENSMUST00000208909 581 ntBASIC14.07□□□□□ -0.16
ClppO88696 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.07□□□□□ -0.16
ClppO88696 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ClppO88696 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms