Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.2□□□□□ -0.14
Slc1a6O35544 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Slc1a6O35544 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Slc1a6O35544 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Slc1a6O35544 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.2□□□□□ -0.14
Slc1a6O35544 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc1a6O35544 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.19□□□□□ -0.14
Slc1a6O35544 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc1a6O35544 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc1a6O35544 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.19□□□□□ -0.14
Slc1a6O35544 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Slc1a6O35544 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.19□□□□□ -0.14
Slc1a6O35544 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Slc1a6O35544 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc1a6O35544 Acot6-202ENSMUST00000222921 3622 ntBASIC14.19□□□□□ -0.14
Slc1a6O35544 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Slc1a6O35544 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Slc1a6O35544 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.18□□□□□ -0.14
Slc1a6O35544 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.18□□□□□ -0.14
Slc1a6O35544 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.18□□□□□ -0.14
Slc1a6O35544 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.18□□□□□ -0.14
Slc1a6O35544 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.18□□□□□ -0.14
Slc1a6O35544 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Slc1a6O35544 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.18□□□□□ -0.14
Slc1a6O35544 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.18□□□□□ -0.14
Slc1a6O35544 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.18□□□□□ -0.14
Slc1a6O35544 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc1a6O35544 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Slc1a6O35544 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Slc1a6O35544 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Slc1a6O35544 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.17□□□□□ -0.14
Slc1a6O35544 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.17□□□□□ -0.14
Slc1a6O35544 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.17□□□□□ -0.14
Slc1a6O35544 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Slc1a6O35544 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms