Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Alx4O35137 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.85□□□□□ -0.35
Alx4O35137 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.85□□□□□ -0.35
Alx4O35137 AV026068-213ENSMUST00000223675 1171 ntBASIC12.85□□□□□ -0.35
Alx4O35137 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.85□□□□□ -0.35
Alx4O35137 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.85□□□□□ -0.35
Alx4O35137 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Alx4O35137 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Alx4O35137 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.85□□□□□ -0.35
Alx4O35137 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Alx4O35137 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Alx4O35137 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.84□□□□□ -0.35
Alx4O35137 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Alx4O35137 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Alx4O35137 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.84□□□□□ -0.35
Alx4O35137 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
Alx4O35137 Gm37230-201ENSMUST00000194491 818 ntBASIC12.84□□□□□ -0.35
Alx4O35137 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
Alx4O35137 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.84□□□□□ -0.35
Alx4O35137 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
Alx4O35137 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Alx4O35137 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Alx4O35137 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.84□□□□□ -0.35
Alx4O35137 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Alx4O35137 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Alx4O35137 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Alx4O35137 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Alx4O35137 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Alx4O35137 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Alx4O35137 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Alx4O35137 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Gm15173-201ENSMUST00000122049 433 ntBASIC12.83□□□□□ -0.36
Alx4O35137 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.83□□□□□ -0.36
Alx4O35137 Gm34391-201ENSMUST00000203706 907 ntBASIC12.83□□□□□ -0.36
Alx4O35137 Gm45098-201ENSMUST00000207179 657 ntBASIC12.83□□□□□ -0.36
Alx4O35137 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.83□□□□□ -0.36
Alx4O35137 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.83□□□□□ -0.36
Alx4O35137 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.83□□□□□ -0.36
Alx4O35137 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Alx4O35137 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Alx4O35137 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Alx4O35137 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Alx4O35137 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms