Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Gm18246-201ENSMUST00000221023 728 ntBASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Shisa8J3QNX5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Shisa8J3QNX5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Gm6089-201ENSMUST00000197666 938 ntBASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.14□□□□□ -0.31
Shisa8J3QNX5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.14□□□□□ -0.31
Shisa8J3QNX5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Gm8749-201ENSMUST00000117737 331 ntBASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Gm13464-201ENSMUST00000119418 935 ntBASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shisa8J3QNX5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shisa8J3QNX5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms