Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3139J3QK78 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.34□□□□□ -0.11
Gm3139J3QK78 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.34□□□□□ -0.11
Gm3139J3QK78 Gm12428-201ENSMUST00000119844 727 ntBASIC14.34□□□□□ -0.11
Gm3139J3QK78 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.34□□□□□ -0.11
Gm3139J3QK78 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Gm27321-201ENSMUST00000185021 205 ntBASIC14.34□□□□□ -0.11
Gm3139J3QK78 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Gm46209-201ENSMUST00000217912 553 ntBASIC14.34□□□□□ -0.11
Gm3139J3QK78 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3139J3QK78 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3139J3QK78 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3139J3QK78 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3139J3QK78 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3139J3QK78 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3139J3QK78 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3139J3QK78 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3139J3QK78 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3139J3QK78 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Gm3139J3QK78 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Gm3139J3QK78 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Mir7684-201ENSMUST00000183858 60 ntBASIC14.33□□□□□ -0.12
Gm3139J3QK78 Gm7775-201ENSMUST00000218871 853 ntBASIC14.33□□□□□ -0.12
Gm3139J3QK78 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.33□□□□□ -0.12
Gm3139J3QK78 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.33□□□□□ -0.12
Gm3139J3QK78 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.33□□□□□ -0.12
Gm3139J3QK78 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Gm12151-201ENSMUST00000121374 290 ntBASIC14.32□□□□□ -0.12
Gm3139J3QK78 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm3139J3QK78 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3139J3QK78 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.31□□□□□ -0.12
Gm3139J3QK78 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3139J3QK78 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3139J3QK78 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms