Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm13612-201ENSMUST00000119276 390 ntBASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 AC166997.1-201ENSMUST00000225122 572 ntBASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Gm14660-201ENSMUST00000119809 575 ntBASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Snora78-201ENSMUST00000158630 128 ntBASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Gm8652-201ENSMUST00000181363 964 ntBASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcf11G3X9Z4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcf11G3X9Z4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Pcf11G3X9Z4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Gm8062-201ENSMUST00000139696 444 ntBASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC21.45■■□□□ 1.02
Pcf11G3X9Z4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Gm43630-201ENSMUST00000201550 776 ntBASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Gm44799-201ENSMUST00000207639 1202 ntBASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Gm38102-201ENSMUST00000192791 1935 ntBASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Gm6007-201ENSMUST00000208170 823 ntBASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcf11G3X9Z4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Gm16342-201ENSMUST00000124025 1025 ntBASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcf11G3X9Z4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms