Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx1-1G3UXB3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx1-1G3UXB3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx1-1G3UXB3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.71■□□□□ 0.26
Nkx1-1G3UXB3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nkx1-1G3UXB3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nkx1-1G3UXB3 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Gm12664-201ENSMUST00000118306 913 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Gm13487-201ENSMUST00000122240 864 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Gm23757-201ENSMUST00000158353 100 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Gm27514-201ENSMUST00000183692 110 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Gm8099-201ENSMUST00000200510 742 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Gm29787-201ENSMUST00000222129 849 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.7■□□□□ 0.26
Nkx1-1G3UXB3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Gm1848-201ENSMUST00000120711 789 ntBASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx1-1G3UXB3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Cfhr3-201ENSMUST00000170441 1022 ntBASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Gm44332-201ENSMUST00000203712 433 ntBASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx1-1G3UXB3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx1-1G3UXB3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms