Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc149F6V035 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc149F6V035 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc149F6V035 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc149F6V035 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc149F6V035 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc149F6V035 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc149F6V035 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc149F6V035 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Ccdc149F6V035 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Gm12585-201ENSMUST00000117307 290 ntBASIC14.59□□□□□ -0.07
Ccdc149F6V035 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.59□□□□□ -0.07
Ccdc149F6V035 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc149F6V035 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc149F6V035 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc149F6V035 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc149F6V035 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc149F6V035 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc149F6V035 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc149F6V035 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc149F6V035 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Gm15393-201ENSMUST00000120499 219 ntBASIC14.58□□□□□ -0.08
Ccdc149F6V035 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.58□□□□□ -0.08
Ccdc149F6V035 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc149F6V035 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc149F6V035 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Gm12882-201ENSMUST00000121696 517 ntBASIC14.57□□□□□ -0.08
Ccdc149F6V035 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc149F6V035 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms