Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Gm12846-201ENSMUST00000120431 1373 ntBASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Gm27516-201ENSMUST00000184237 98 ntBASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Gm18056-201ENSMUST00000207670 568 ntBASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Gm18061-201ENSMUST00000208350 562 ntBASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Gm18063-201ENSMUST00000208529 568 ntBASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Gm18052-201ENSMUST00000208750 559 ntBASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Gm24526-201ENSMUST00000082921 158 ntBASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hfm1D3Z4R1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Gm38266-201ENSMUST00000194931 421 ntBASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 AC159747.1-201ENSMUST00000219903 265 ntBASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Gm5161-201ENSMUST00000075243 853 ntBASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hfm1D3Z4R1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Gm1335-201ENSMUST00000121653 386 ntBASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hfm1D3Z4R1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Gm11793-201ENSMUST00000120433 981 ntBASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Gm43758-201ENSMUST00000199500 367 ntBASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Gm24447-201ENSMUST00000083977 338 ntBASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms