Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Shank1D3YZU1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.88□□□□□ -0.35
Shank1D3YZU1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.88□□□□□ -0.35
Shank1D3YZU1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.88□□□□□ -0.35
Shank1D3YZU1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Shank1D3YZU1 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.87□□□□□ -0.35
Shank1D3YZU1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.87□□□□□ -0.35
Shank1D3YZU1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.87□□□□□ -0.35
Shank1D3YZU1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.87□□□□□ -0.35
Shank1D3YZU1 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.87□□□□□ -0.35
Shank1D3YZU1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.87□□□□□ -0.35
Shank1D3YZU1 Dancr-204ENSMUST00000132389 2347 ntBASIC12.87□□□□□ -0.35
Shank1D3YZU1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Gm9257-201ENSMUST00000221254 232 ntBASIC12.87□□□□□ -0.35
Shank1D3YZU1 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.87□□□□□ -0.35
Shank1D3YZU1 Gm10478-201ENSMUST00000084451 396 ntBASIC12.87□□□□□ -0.35
Shank1D3YZU1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shank1D3YZU1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.87□□□□□ -0.35
Shank1D3YZU1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Gm12585-201ENSMUST00000117307 290 ntBASIC12.86□□□□□ -0.35
Shank1D3YZU1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms