Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb2S4R1M3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Gm18737-201ENSMUST00000173594 937 ntBASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb2S4R1M3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Gm25911-201ENSMUST00000157621 56 ntBASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.42□□□□□ -0.1
H2afb2S4R1M3 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb2S4R1M3 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Gm10275-202ENSMUST00000168697 495 ntBASIC14.41□□□□□ -0.1
H2afb2S4R1M3 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.41□□□□□ -0.1
H2afb2S4R1M3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Gm10275-201ENSMUST00000092620 635 ntBASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb2S4R1M3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms