Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.95■□□□□ 0.46
Hdac6Q9Z2V5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Gm15376-201ENSMUST00000122258 783 ntBASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Gm42693-201ENSMUST00000196779 631 ntBASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Gm18027-201ENSMUST00000218947 619 ntBASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hdac6Q9Z2V5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac6Q9Z2V5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Gm10478-201ENSMUST00000084451 396 ntBASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Gm6091-201ENSMUST00000098307 165 ntBASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac6Q9Z2V5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Gm13385-201ENSMUST00000121089 220 ntBASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Gm26464-201ENSMUST00000157094 305 ntBASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Gm27847-201ENSMUST00000183711 107 ntBASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Gm27375-201ENSMUST00000183799 107 ntBASIC17.91■□□□□ 0.46
Hdac6Q9Z2V5 Gm27731-201ENSMUST00000185192 107 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms