Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Smarcb1Q9Z0H3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcb1Q9Z0H3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Gm28631-201ENSMUST00000190740 334 ntBASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.92□□□□□ -0.02
Smarcb1Q9Z0H3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Gm4804-201ENSMUST00000182234 999 ntBASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Gm5425-201ENSMUST00000214125 459 ntBASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms