Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six6Q9QZ28 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Six6Q9QZ28 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.21□□□□□ -0.45
Six6Q9QZ28 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.21□□□□□ -0.45
Six6Q9QZ28 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.21□□□□□ -0.45
Six6Q9QZ28 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six6Q9QZ28 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Six6Q9QZ28 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Six6Q9QZ28 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Six6Q9QZ28 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Gm10653-202ENSMUST00000139570 835 ntBASIC12.2□□□□□ -0.46
Six6Q9QZ28 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Gm10499-201ENSMUST00000174094 934 ntBASIC12.2□□□□□ -0.46
Six6Q9QZ28 Gm18622-201ENSMUST00000219361 595 ntBASIC12.2□□□□□ -0.46
Six6Q9QZ28 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.2□□□□□ -0.46
Six6Q9QZ28 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.2□□□□□ -0.46
Six6Q9QZ28 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six6Q9QZ28 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Six6Q9QZ28 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.2□□□□□ -0.46
Six6Q9QZ28 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six6Q9QZ28 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms