Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ube3bQ9ES34 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ube3bQ9ES34 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Gm15460-201ENSMUST00000118147 391 ntBASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Gm29667-201ENSMUST00000190817 490 ntBASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3bQ9ES34 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Gm15321-201ENSMUST00000121290 288 ntBASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Gm24694-201ENSMUST00000180054 110 ntBASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Gm27663-201ENSMUST00000184839 110 ntBASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3bQ9ES34 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ube3bQ9ES34 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ube3bQ9ES34 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube3bQ9ES34 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube3bQ9ES34 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube3bQ9ES34 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ube3bQ9ES34 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Gm12585-201ENSMUST00000117307 290 ntBASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.07■□□□□ 0.32
Ube3bQ9ES34 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3bQ9ES34 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ube3bQ9ES34 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ube3bQ9ES34 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3bQ9ES34 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms