Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
U2af1Q9D883 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1Q9D883 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.94■□□□□ 0.62
U2af1Q9D883 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
U2af1Q9D883 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.94■□□□□ 0.62
U2af1Q9D883 Gm27680-201ENSMUST00000184192 160 ntBASIC18.94■□□□□ 0.62
U2af1Q9D883 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.94■□□□□ 0.62
U2af1Q9D883 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.94■□□□□ 0.62
U2af1Q9D883 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Mir125a-201ENSMUST00000083545 68 ntBASIC18.94■□□□□ 0.62
U2af1Q9D883 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.94■□□□□ 0.62
U2af1Q9D883 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2af1Q9D883 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
U2af1Q9D883 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
U2af1Q9D883 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
U2af1Q9D883 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
U2af1Q9D883 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.93■□□□□ 0.62
U2af1Q9D883 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.93■□□□□ 0.62
U2af1Q9D883 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.93■□□□□ 0.62
U2af1Q9D883 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
U2af1Q9D883 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
U2af1Q9D883 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.93■□□□□ 0.62
U2af1Q9D883 BC001981-202ENSMUST00000191393 1545 ntBASIC18.93■□□□□ 0.62
U2af1Q9D883 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.93■□□□□ 0.62
U2af1Q9D883 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
U2af1Q9D883 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2af1Q9D883 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.92■□□□□ 0.62
U2af1Q9D883 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
U2af1Q9D883 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
U2af1Q9D883 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.92■□□□□ 0.62
U2af1Q9D883 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.92■□□□□ 0.62
U2af1Q9D883 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.92■□□□□ 0.62
U2af1Q9D883 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.92■□□□□ 0.62
U2af1Q9D883 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.92■□□□□ 0.62
U2af1Q9D883 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.92■□□□□ 0.62
U2af1Q9D883 Gm46209-201ENSMUST00000217912 553 ntBASIC18.92■□□□□ 0.62
U2af1Q9D883 Gm7775-201ENSMUST00000218871 853 ntBASIC18.92■□□□□ 0.62
U2af1Q9D883 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
U2af1Q9D883 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.92■□□□□ 0.62
U2af1Q9D883 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
U2af1Q9D883 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.92■□□□□ 0.62
U2af1Q9D883 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
U2af1Q9D883 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2af1Q9D883 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.91■□□□□ 0.62
U2af1Q9D883 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
U2af1Q9D883 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.91■□□□□ 0.62
U2af1Q9D883 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms