Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a3Q9D554 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a3Q9D554 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sf3a3Q9D554 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.64□□□□□ -0.07
Sf3a3Q9D554 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sf3a3Q9D554 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Gm7506-201ENSMUST00000207758 815 ntBASIC14.63□□□□□ -0.07
Sf3a3Q9D554 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.63□□□□□ -0.07
Sf3a3Q9D554 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sf3a3Q9D554 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Gm13312-201ENSMUST00000119631 718 ntBASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Gm15794-201ENSMUST00000120182 631 ntBASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sf3a3Q9D554 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.61□□□□□ -0.07
Sf3a3Q9D554 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sf3a3Q9D554 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a3Q9D554 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a3Q9D554 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a3Q9D554 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a3Q9D554 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a3Q9D554 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms