Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Prpf8Q99PV0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Prpf8Q99PV0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.84□□□□□ -0.51
Prpf8Q99PV0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prpf8Q99PV0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.83□□□□□ -0.51
Prpf8Q99PV0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
Prpf8Q99PV0 Mir6420-201ENSMUST00000185032 102 ntBASIC11.83□□□□□ -0.51
Prpf8Q99PV0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.83□□□□□ -0.51
Prpf8Q99PV0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.83□□□□□ -0.51
Prpf8Q99PV0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.83□□□□□ -0.51
Prpf8Q99PV0 Gm16476-201ENSMUST00000221544 139 ntBASIC11.83□□□□□ -0.51
Prpf8Q99PV0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Prpf8Q99PV0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.83□□□□□ -0.51
Prpf8Q99PV0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Prpf8Q99PV0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.83□□□□□ -0.51
Prpf8Q99PV0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Gm45098-201ENSMUST00000207179 657 ntBASIC11.83□□□□□ -0.52
Prpf8Q99PV0 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.83□□□□□ -0.52
Prpf8Q99PV0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.83□□□□□ -0.52
Prpf8Q99PV0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Gm27631-201ENSMUST00000184163 466 ntBASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Gm37230-201ENSMUST00000194491 818 ntBASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Gm14042-201ENSMUST00000120139 833 ntBASIC11.82□□□□□ -0.52
Prpf8Q99PV0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prpf8Q99PV0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Gm9229-201ENSMUST00000222777 126 ntBASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Gm20445-201ENSMUST00000061905 565 ntBASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prpf8Q99PV0 BC001981-202ENSMUST00000191393 1545 ntBASIC11.81□□□□□ -0.52
Prpf8Q99PV0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms