Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim34aQ99PP6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim34aQ99PP6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim34aQ99PP6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim34aQ99PP6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Gm15806-201ENSMUST00000120696 955 ntBASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Gm4804-201ENSMUST00000182234 999 ntBASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim34aQ99PP6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms