Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm10146-201ENSMUST00000072739 309 ntBASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Gm42550-201ENSMUST00000201553 960 ntBASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Itm2b-204ENSMUST00000228637 783 ntBASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.98■□□□□ 0.15
Pcdh15Q99PJ1 Carlr-201ENSMUST00000181515 2574 ntBASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Gm29741-201ENSMUST00000192667 421 ntBASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.97■□□□□ 0.15
Pcdh15Q99PJ1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Gm6222-202ENSMUST00000182143 629 ntBASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh15Q99PJ1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Gm12403-201ENSMUST00000121384 959 ntBASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Rps4l-202ENSMUST00000204242 789 ntBASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh15Q99PJ1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Gm11618-201ENSMUST00000117946 267 ntBASIC15.95■□□□□ 0.14
Pcdh15Q99PJ1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms