Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cstf1Q99LC2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf1Q99LC2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf1Q99LC2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Gm12957-201ENSMUST00000117835 377 ntBASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Gm28911-201ENSMUST00000188837 117 ntBASIC14.38□□□□□ -0.11
Cstf1Q99LC2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms