Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.54□□□□□ -0.08
Cdk9Q99J95 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk9Q99J95 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.53□□□□□ -0.08
Cdk9Q99J95 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.53□□□□□ -0.08
Cdk9Q99J95 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.53□□□□□ -0.08
Cdk9Q99J95 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk9Q99J95 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.52□□□□□ -0.08
Cdk9Q99J95 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk9Q99J95 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk9Q99J95 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cdk9Q99J95 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk9Q99J95 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk9Q99J95 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk9Q99J95 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.52□□□□□ -0.08
Cdk9Q99J95 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Cdk9Q99J95 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk9Q99J95 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk9Q99J95 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.52□□□□□ -0.09
Cdk9Q99J95 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cdk9Q99J95 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk9Q99J95 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms