Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb22Q91XZ8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb22Q91XZ8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Gm45453-201ENSMUST00000211758 853 ntBASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb22Q91XZ8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Gm27430-201ENSMUST00000184585 107 ntBASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Gm44333-201ENSMUST00000197168 107 ntBASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb22Q91XZ8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Gm13616-201ENSMUST00000120600 222 ntBASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb22Q91XZ8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb22Q91XZ8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb22Q91XZ8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb22Q91XZ8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb22Q91XZ8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb22Q91XZ8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb22Q91XZ8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb22Q91XZ8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb22Q91XZ8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb22Q91XZ8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb22Q91XZ8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms