Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb17Q91VD8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm25287-201ENSMUST00000103846 110 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm22918-201ENSMUST00000103855 110 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm18352-201ENSMUST00000189113 902 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm37024-201ENSMUST00000192224 868 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm44335-201ENSMUST00000196879 141 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm44297-201ENSMUST00000198304 141 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm44346-201ENSMUST00000198851 141 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm43952-201ENSMUST00000203765 751 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm45098-201ENSMUST00000207179 657 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm22005-201ENSMUST00000082795 141 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Gm20541-201ENSMUST00000173035 1406 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 AC122539.3-201ENSMUST00000218355 1431 ntBASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb17Q91VD8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Mir466f-2-201ENSMUST00000104805 94 ntBASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Gm15937-201ENSMUST00000120727 1235 ntBASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Gm23673-201ENSMUST00000157474 298 ntBASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Gm44061-201ENSMUST00000203962 1195 ntBASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb17Q91VD8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms