Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Gm44492-201ENSMUST00000197012 141 ntBASIC12.09□□□□□ -0.47
H1fooQ8VIK3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Gm9182-201ENSMUST00000217829 639 ntBASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.09□□□□□ -0.47
H1fooQ8VIK3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
H1fooQ8VIK3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gm18206-201ENSMUST00000207027 926 ntBASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H1fooQ8VIK3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms