Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nup35Q8R4R6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup35Q8R4R6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Gm6089-201ENSMUST00000197666 938 ntBASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Olfr286-202ENSMUST00000205305 969 ntBASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Gm18246-201ENSMUST00000221023 728 ntBASIC11.77□□□□□ -0.53
Nup35Q8R4R6 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup35Q8R4R6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup35Q8R4R6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nup35Q8R4R6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms