Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 AC114543.1-201ENSMUST00000226451 1558 ntBASIC20.26■□□□□ 0.83
Cd109Q8R422 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Gm7067-201ENSMUST00000207698 1249 ntBASIC20.26■□□□□ 0.83
Cd109Q8R422 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cd109Q8R422 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd109Q8R422 Gm42471-201ENSMUST00000201457 1865 ntBASIC20.25■□□□□ 0.83
Cd109Q8R422 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC20.25■□□□□ 0.83
Cd109Q8R422 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Cd109Q8R422 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Gm11524-201ENSMUST00000119349 807 ntBASIC20.25■□□□□ 0.83
Cd109Q8R422 Gm26464-201ENSMUST00000157094 305 ntBASIC20.25■□□□□ 0.83
Cd109Q8R422 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd109Q8R422 Mir497b-201ENSMUST00000093601 125 ntBASIC20.25■□□□□ 0.83
Cd109Q8R422 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC20.25■□□□□ 0.83
Cd109Q8R422 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC20.24■□□□□ 0.83
Cd109Q8R422 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC20.24■□□□□ 0.83
Cd109Q8R422 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Cd109Q8R422 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC20.24■□□□□ 0.83
Cd109Q8R422 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cd109Q8R422 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC20.24■□□□□ 0.83
Cd109Q8R422 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Cd109Q8R422 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC20.24■□□□□ 0.83
Cd109Q8R422 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC20.24■□□□□ 0.83
Cd109Q8R422 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC20.24■□□□□ 0.83
Cd109Q8R422 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cd109Q8R422 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Cd109Q8R422 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd109Q8R422 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd109Q8R422 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd109Q8R422 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd109Q8R422 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cd109Q8R422 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd109Q8R422 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cd109Q8R422 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cd109Q8R422 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC20.23■□□□□ 0.83
Cd109Q8R422 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cd109Q8R422 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC20.23■□□□□ 0.83
Cd109Q8R422 Gm27892-201ENSMUST00000185017 106 ntBASIC20.23■□□□□ 0.83
Cd109Q8R422 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd109Q8R422 Ighv1-51-201ENSMUST00000192903 354 ntBASIC20.23■□□□□ 0.83
Cd109Q8R422 Gm43094-201ENSMUST00000196549 921 ntBASIC20.23■□□□□ 0.83
Cd109Q8R422 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd109Q8R422 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd109Q8R422 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cd109Q8R422 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd109Q8R422 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd109Q8R422 AC115735.4-201ENSMUST00000227460 1944 ntBASIC20.23■□□□□ 0.83
Cd109Q8R422 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd109Q8R422 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cd109Q8R422 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd109Q8R422 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd109Q8R422 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cd109Q8R422 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cd109Q8R422 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cd109Q8R422 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd109Q8R422 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd109Q8R422 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC20.22■□□□□ 0.83
Cd109Q8R422 Gm6244-201ENSMUST00000178732 841 ntBASIC20.22■□□□□ 0.83
Cd109Q8R422 Gm4971-201ENSMUST00000205991 1108 ntBASIC20.22■□□□□ 0.83
Cd109Q8R422 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC20.22■□□□□ 0.83
Cd109Q8R422 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cd109Q8R422 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd109Q8R422 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms