Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc58Q8R3Q6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Gm27357-201ENSMUST00000183754 135 ntBASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Gm27704-201ENSMUST00000185094 107 ntBASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Gm6296-201ENSMUST00000222599 943 ntBASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc58Q8R3Q6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc58Q8R3Q6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc58Q8R3Q6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc58Q8R3Q6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc58Q8R3Q6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc58Q8R3Q6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Gm12895-201ENSMUST00000122214 226 ntBASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms