Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Chmp7Q8R1T1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp7Q8R1T1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp7Q8R1T1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp7Q8R1T1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp7Q8R1T1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp7Q8R1T1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Chmp7Q8R1T1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Gm5354-201ENSMUST00000182417 973 ntBASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Gm21470-201ENSMUST00000187680 696 ntBASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp7Q8R1T1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Gm8602-201ENSMUST00000184045 607 ntBASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp7Q8R1T1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.37■□□□□ 0.53
Chmp7Q8R1T1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Gm25857-201ENSMUST00000082788 129 ntBASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms