Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nudcd3Q8R1N4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nudcd3Q8R1N4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nudcd3Q8R1N4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nudcd3Q8R1N4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nudcd3Q8R1N4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nudcd3Q8R1N4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nudcd3Q8R1N4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nudcd3Q8R1N4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nudcd3Q8R1N4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nudcd3Q8R1N4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Gm13464-201ENSMUST00000119418 935 ntBASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Gm17807-201ENSMUST00000186869 298 ntBASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nudcd3Q8R1N4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd3Q8R1N4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms