Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sf3a1Q8K4Z5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Gm23547-201ENSMUST00000158210 271 ntBASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Gm7774-201ENSMUST00000200064 533 ntBASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sf3a1Q8K4Z5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sf3a1Q8K4Z5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Sf3a1Q8K4Z5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Gm14042-201ENSMUST00000120139 833 ntBASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Gm5779-201ENSMUST00000218467 910 ntBASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sf3a1Q8K4Z5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Gm10275-202ENSMUST00000168697 495 ntBASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Gm10275-201ENSMUST00000092620 635 ntBASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms