Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Gm13365-201ENSMUST00000121188 973 ntBASIC13.62□□□□□ -0.23
Clrn1Q8K445 Gm2756-201ENSMUST00000195851 400 ntBASIC13.62□□□□□ -0.23
Clrn1Q8K445 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Clrn1Q8K445 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.62□□□□□ -0.23
Clrn1Q8K445 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn1Q8K445 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.61□□□□□ -0.23
Clrn1Q8K445 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.61□□□□□ -0.23
Clrn1Q8K445 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Gm37230-201ENSMUST00000194491 818 ntBASIC13.61□□□□□ -0.23
Clrn1Q8K445 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.61□□□□□ -0.23
Clrn1Q8K445 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.61□□□□□ -0.23
Clrn1Q8K445 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn1Q8K445 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Gm6736-201ENSMUST00000166583 948 ntBASIC13.6□□□□□ -0.23
Clrn1Q8K445 Gm18889-201ENSMUST00000174284 929 ntBASIC13.6□□□□□ -0.23
Clrn1Q8K445 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms