Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Gm17271-201ENSMUST00000165535 355 ntBASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Gm45747-201ENSMUST00000212203 999 ntBASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Trerf1Q8BXJ2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Gm14822-201ENSMUST00000122247 291 ntBASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trerf1Q8BXJ2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Efs-202ENSMUST00000227037 2540 ntBASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Gm16198-201ENSMUST00000118766 670 ntBASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Thap2-203ENSMUST00000218989 527 ntBASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trerf1Q8BXJ2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms