Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Mir8098-201ENSMUST00000184011 137 ntBASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm27300-201ENSMUST00000184085 97 ntBASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm27335-201ENSMUST00000184758 97 ntBASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm5864-201ENSMUST00000202263 970 ntBASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm10819-201ENSMUST00000099988 561 ntBASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm13884-201ENSMUST00000118103 829 ntBASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm2451-201ENSMUST00000199447 999 ntBASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm10290-201ENSMUST00000200451 999 ntBASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm15590-201ENSMUST00000078419 552 ntBASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp2bQ8BJF9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp2bQ8BJF9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms