Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vma21Q78T54 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vma21Q78T54 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Vma21Q78T54 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Vma21Q78T54 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vma21Q78T54 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vma21Q78T54 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.76□□□□□ -0.53
Vma21Q78T54 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.76□□□□□ -0.53
Vma21Q78T54 Gm7153-201ENSMUST00000117092 455 ntBASIC11.76□□□□□ -0.53
Vma21Q78T54 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.76□□□□□ -0.53
Vma21Q78T54 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.76□□□□□ -0.53
Vma21Q78T54 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.76□□□□□ -0.53
Vma21Q78T54 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.76□□□□□ -0.53
Vma21Q78T54 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Vma21Q78T54 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vma21Q78T54 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vma21Q78T54 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.75□□□□□ -0.53
Vma21Q78T54 Gm14042-201ENSMUST00000120139 833 ntBASIC11.75□□□□□ -0.53
Vma21Q78T54 Gm11452-201ENSMUST00000122376 690 ntBASIC11.75□□□□□ -0.53
Vma21Q78T54 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Mir8098-201ENSMUST00000184011 137 ntBASIC11.75□□□□□ -0.53
Vma21Q78T54 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.75□□□□□ -0.53
Vma21Q78T54 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.75□□□□□ -0.53
Vma21Q78T54 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.75□□□□□ -0.53
Vma21Q78T54 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Vma21Q78T54 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vma21Q78T54 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Vma21Q78T54 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Vma21Q78T54 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.74□□□□□ -0.53
Vma21Q78T54 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vma21Q78T54 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms