Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AtmQ62388 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AtmQ62388 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.39□□□□□ -0.27
AtmQ62388 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
AtmQ62388 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AtmQ62388 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AtmQ62388 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.38□□□□□ -0.27
AtmQ62388 Gm43094-201ENSMUST00000196549 921 ntBASIC13.38□□□□□ -0.27
AtmQ62388 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
AtmQ62388 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
AtmQ62388 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.38□□□□□ -0.27
AtmQ62388 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.38□□□□□ -0.27
AtmQ62388 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
AtmQ62388 Gm42627-201ENSMUST00000197347 224 ntBASIC13.38□□□□□ -0.27
AtmQ62388 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.38□□□□□ -0.27
AtmQ62388 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AtmQ62388 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
AtmQ62388 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AtmQ62388 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AtmQ62388 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
AtmQ62388 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.37□□□□□ -0.27
AtmQ62388 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
AtmQ62388 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.37□□□□□ -0.27
AtmQ62388 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Gm18905-201ENSMUST00000205454 928 ntBASIC13.37□□□□□ -0.27
AtmQ62388 Gm6334-201ENSMUST00000207083 228 ntBASIC13.37□□□□□ -0.27
AtmQ62388 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.37□□□□□ -0.27
AtmQ62388 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.37□□□□□ -0.27
AtmQ62388 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.37□□□□□ -0.27
AtmQ62388 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.37□□□□□ -0.27
AtmQ62388 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.37□□□□□ -0.27
AtmQ62388 Gm1335-201ENSMUST00000121653 386 ntBASIC13.37□□□□□ -0.27
AtmQ62388 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.37□□□□□ -0.27
AtmQ62388 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.37□□□□□ -0.27
AtmQ62388 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.37□□□□□ -0.27
AtmQ62388 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
AtmQ62388 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AtmQ62388 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.37□□□□□ -0.27
AtmQ62388 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.36□□□□□ -0.27
AtmQ62388 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
AtmQ62388 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
AtmQ62388 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
AtmQ62388 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.36□□□□□ -0.27
AtmQ62388 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.36□□□□□ -0.27
AtmQ62388 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Gm17376-201ENSMUST00000166016 84 ntBASIC13.36□□□□□ -0.27
AtmQ62388 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.36□□□□□ -0.27
AtmQ62388 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
AtmQ62388 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.36□□□□□ -0.27
AtmQ62388 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AtmQ62388 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.36□□□□□ -0.27
AtmQ62388 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.36□□□□□ -0.27
AtmQ62388 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AtmQ62388 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms