Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SspnQ62147 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.09□□□□□ -0.47
SspnQ62147 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.09□□□□□ -0.47
SspnQ62147 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SspnQ62147 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.09□□□□□ -0.47
SspnQ62147 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.09□□□□□ -0.47
SspnQ62147 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SspnQ62147 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.09□□□□□ -0.47
SspnQ62147 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
SspnQ62147 Gm25927-201ENSMUST00000175058 117 ntBASIC12.09□□□□□ -0.47
SspnQ62147 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.09□□□□□ -0.47
SspnQ62147 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.09□□□□□ -0.47
SspnQ62147 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SspnQ62147 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SspnQ62147 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SspnQ62147 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SspnQ62147 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
SspnQ62147 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SspnQ62147 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SspnQ62147 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SspnQ62147 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SspnQ62147 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.09□□□□□ -0.47
SspnQ62147 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
SspnQ62147 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SspnQ62147 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SspnQ62147 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
SspnQ62147 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SspnQ62147 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SspnQ62147 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.08□□□□□ -0.48
SspnQ62147 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.08□□□□□ -0.48
SspnQ62147 Gm18733-201ENSMUST00000173950 856 ntBASIC12.08□□□□□ -0.48
SspnQ62147 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.08□□□□□ -0.48
SspnQ62147 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.08□□□□□ -0.48
SspnQ62147 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.08□□□□□ -0.48
SspnQ62147 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.08□□□□□ -0.48
SspnQ62147 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.08□□□□□ -0.48
SspnQ62147 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SspnQ62147 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms