Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.01■□□□□ 0.31
Ctr9Q62018 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ctr9Q62018 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ctr9Q62018 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ctr9Q62018 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctr9Q62018 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctr9Q62018 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctr9Q62018 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ctr9Q62018 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Gm14057-201ENSMUST00000120631 482 ntBASIC17■□□□□ 0.31
Ctr9Q62018 Gm14767-201ENSMUST00000121559 586 ntBASIC17■□□□□ 0.31
Ctr9Q62018 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Mir1897-201ENSMUST00000122581 272 ntBASIC17■□□□□ 0.31
Ctr9Q62018 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Gm27680-201ENSMUST00000184192 160 ntBASIC17■□□□□ 0.31
Ctr9Q62018 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Ctr9Q62018 Dupd1-202ENSMUST00000224735 548 ntBASIC17■□□□□ 0.31
Ctr9Q62018 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ctr9Q62018 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ctr9Q62018 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctr9Q62018 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ctr9Q62018 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.99■□□□□ 0.31
Ctr9Q62018 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ctr9Q62018 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ctr9Q62018 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.99■□□□□ 0.31
Ctr9Q62018 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.99■□□□□ 0.31
Ctr9Q62018 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Gm44344-201ENSMUST00000200287 129 ntBASIC16.99■□□□□ 0.31
Ctr9Q62018 Gm45453-201ENSMUST00000211758 853 ntBASIC16.99■□□□□ 0.31
Ctr9Q62018 Gm7775-201ENSMUST00000218871 853 ntBASIC16.99■□□□□ 0.31
Ctr9Q62018 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ctr9Q62018 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ctr9Q62018 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ctr9Q62018 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ctr9Q62018 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ctr9Q62018 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ctr9Q62018 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.98■□□□□ 0.31
Ctr9Q62018 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ctr9Q62018 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.98■□□□□ 0.31
Ctr9Q62018 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.98■□□□□ 0.31
Ctr9Q62018 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.98■□□□□ 0.31
Ctr9Q62018 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ctr9Q62018 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ctr9Q62018 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Ctr9Q62018 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ctr9Q62018 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ctr9Q62018 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ctr9Q62018 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ctr9Q62018 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.97■□□□□ 0.31
Ctr9Q62018 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms