Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Vps13aQ5H8C4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Vps13aQ5H8C4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.02□□□□□ -0.16
Vps13aQ5H8C4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps13aQ5H8C4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps13aQ5H8C4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps13aQ5H8C4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.02□□□□□ -0.16
Vps13aQ5H8C4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps13aQ5H8C4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps13aQ5H8C4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Mir433-201ENSMUST00000093564 124 ntBASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps13aQ5H8C4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps13aQ5H8C4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Gm9333-201ENSMUST00000205452 1323 ntBASIC14□□□□□ -0.17
Vps13aQ5H8C4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14□□□□□ -0.17
Vps13aQ5H8C4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Gm7029-201ENSMUST00000173226 450 ntBASIC14□□□□□ -0.17
Vps13aQ5H8C4 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Gm24255-201ENSMUST00000104481 128 ntBASIC14□□□□□ -0.17
Vps13aQ5H8C4 Gm6023-201ENSMUST00000118217 606 ntBASIC14□□□□□ -0.17
Vps13aQ5H8C4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps13aQ5H8C4 Gm8810-201ENSMUST00000172895 754 ntBASIC13.99□□□□□ -0.17
Vps13aQ5H8C4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps13aQ5H8C4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps13aQ5H8C4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms