Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Rprl2-201ENSMUST00000157150 290 ntBASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf20Q5DTM8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Gm2810-201ENSMUST00000118681 990 ntBASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Gm25911-201ENSMUST00000157621 56 ntBASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Gm10275-202ENSMUST00000168697 495 ntBASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Gm10275-201ENSMUST00000092620 635 ntBASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf20Q5DTM8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Mir1895-201ENSMUST00000122615 79 ntBASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Gm27494-201ENSMUST00000184735 189 ntBASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms