Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Scn2bQ56A07 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn2bQ56A07 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.27□□□□□ -0.12
Scn2bQ56A07 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn2bQ56A07 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.27□□□□□ -0.12
Scn2bQ56A07 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.27□□□□□ -0.12
Scn2bQ56A07 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn2bQ56A07 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn2bQ56A07 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.27□□□□□ -0.12
Scn2bQ56A07 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn2bQ56A07 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Scn2bQ56A07 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.27□□□□□ -0.13
Scn2bQ56A07 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Gm2213-201ENSMUST00000197485 688 ntBASIC14.27□□□□□ -0.13
Scn2bQ56A07 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.27□□□□□ -0.13
Scn2bQ56A07 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn2bQ56A07 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Mir8117-201ENSMUST00000184773 107 ntBASIC14.26□□□□□ -0.13
Scn2bQ56A07 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn2bQ56A07 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Scn2bQ56A07 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.25□□□□□ -0.13
Scn2bQ56A07 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Gm14494-201ENSMUST00000118786 435 ntBASIC14.25□□□□□ -0.13
Scn2bQ56A07 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.25□□□□□ -0.13
Scn2bQ56A07 Gm11594-201ENSMUST00000122313 162 ntBASIC14.25□□□□□ -0.13
Scn2bQ56A07 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.25□□□□□ -0.13
Scn2bQ56A07 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms