Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Gm16342-201ENSMUST00000124025 1025 ntBASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Gm27772-201ENSMUST00000184900 187 ntBASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Arhgef40Q3UPH7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Gm14730-201ENSMUST00000122378 1045 ntBASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Gm27486-201ENSMUST00000184923 80 ntBASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Gm42442-201ENSMUST00000197951 1133 ntBASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Gm7498-201ENSMUST00000203282 1084 ntBASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Arhgef40Q3UPH7 Gm13859-201ENSMUST00000119936 1423 ntBASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Gm38230-201ENSMUST00000193572 1159 ntBASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Arhgef40Q3UPH7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Gm12329-201ENSMUST00000120829 1007 ntBASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Gm18222-201ENSMUST00000202416 1387 ntBASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Arhgef40Q3UPH7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Zscan30-202ENSMUST00000224144 1458 ntBASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Arhgef40Q3UPH7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms