Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Celf4-206ENSMUST00000224553 1729 ntBASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cks1brtQ3UNC9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Gm7213-201ENSMUST00000215977 950 ntBASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Otx2os1-204ENSMUST00000227221 751 ntBASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.36□□□□□ -0.75
Cks1brtQ3UNC9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cks1brtQ3UNC9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms