Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Gm18489-201ENSMUST00000172565 551 ntBASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Mir3081-201ENSMUST00000175305 84 ntBASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Gm9182-201ENSMUST00000217829 639 ntBASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim6Q3U0I6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smim6Q3U0I6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Olfr286-202ENSMUST00000205305 969 ntBASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smim6Q3U0I6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms