Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm7222-201ENSMUST00000117512 906 ntBASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Gm11764-201ENSMUST00000120221 623 ntBASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Mir5131-201ENSMUST00000175426 93 ntBASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Mir5126-201ENSMUST00000175513 77 ntBASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 AV026068-213ENSMUST00000223675 1171 ntBASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43aQ3TL54 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Gm12350-201ENSMUST00000121208 462 ntBASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Gm2451-201ENSMUST00000199447 999 ntBASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Gm10290-201ENSMUST00000200451 999 ntBASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43aQ3TL54 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Gm1401-201ENSMUST00000122048 772 ntBASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Gm18206-201ENSMUST00000207027 926 ntBASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim43aQ3TL54 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim43aQ3TL54 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms