Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.61□□□□□ -0.07
Ebf1Q07802 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ebf1Q07802 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ebf1Q07802 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ebf1Q07802 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.61□□□□□ -0.07
Ebf1Q07802 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.61□□□□□ -0.07
Ebf1Q07802 Gm5479-201ENSMUST00000160578 435 ntBASIC14.61□□□□□ -0.07
Ebf1Q07802 Gm29667-201ENSMUST00000190817 490 ntBASIC14.61□□□□□ -0.07
Ebf1Q07802 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.61□□□□□ -0.07
Ebf1Q07802 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.61□□□□□ -0.07
Ebf1Q07802 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ebf1Q07802 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.61□□□□□ -0.07
Ebf1Q07802 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Ebf1Q07802 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ebf1Q07802 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Efs-202ENSMUST00000227037 2540 ntBASIC14.6□□□□□ -0.07
Ebf1Q07802 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.6□□□□□ -0.07
Ebf1Q07802 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Gm15653-201ENSMUST00000119247 907 ntBASIC14.6□□□□□ -0.07
Ebf1Q07802 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ebf1Q07802 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.6□□□□□ -0.07
Ebf1Q07802 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ebf1Q07802 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Ebf1Q07802 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ebf1Q07802 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ebf1Q07802 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ebf1Q07802 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ebf1Q07802 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.59□□□□□ -0.07
Ebf1Q07802 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Ebf1Q07802 Gm14928-201ENSMUST00000120198 477 ntBASIC14.59□□□□□ -0.07
Ebf1Q07802 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.59□□□□□ -0.07
Ebf1Q07802 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.59□□□□□ -0.07
Ebf1Q07802 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.59□□□□□ -0.07
Ebf1Q07802 Gm43433-201ENSMUST00000196573 481 ntBASIC14.59□□□□□ -0.07
Ebf1Q07802 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.59□□□□□ -0.07
Ebf1Q07802 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.59□□□□□ -0.07
Ebf1Q07802 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.59□□□□□ -0.07
Ebf1Q07802 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ebf1Q07802 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms